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A practical guide to Human Genetics with Lifetime Data1 months ago
Survival | Concordance and Casewise | Competing risk using additive Gamma | Competing risk modeling using the Liabilty Threshold model | SessionInfo
Analysis of bivariate binomial data: Twin analysis1 months ago
Overview | Biprobit with random effects | Pairwise odds ratio model | Additive gamma model | The twin-stutter data | Bivariate Probit model | Polygenic modelling | Additive gamma random effects | SessionInfo
Analysis of multivariate binomial data: family analysis1 months ago
Overview | Simulated family data | Additive Gamma model | Pairwise fitting | Pairwise dependence modelling | Pairwise odds ratio model | SessionInfo
Analysis of multivariate survival data1 months ago
Overview | Gamma distributed frailties | Additive Gamma frailties | Univariate gamma (clayton-oakes) model twostage models | Piecewise constant Clayton-Oakes model | Multivariate gamma twostage models | Family data | Pairwise specification of random effects and variances | Pairwise dependence modelling | Univariate plackett model twostage models | SessionInfo
Average treatment effect (ATE) for Competing risks and binary outcomes1 months ago
Average treatment effect | Average treatment for Competing risks data | Average treatment effect for binary or continuous responses | SessionInfo
Average treatment effect (ATE) for Restricted mean survival and years lost of Competing risks1 months ago
RMST | Average treatment effect | SessionInfo
Binomial Regression for Survival and Competing Risks Data1 months ago
Binomial Regression for censored data | Details | Examples | Absolute risk differences and ratio | SessionInfo
Cooking Survival Data: 5-Minute Recipes1 months ago
Overview | Hazard based, Cox models | Delayed entry | Parametric hazard models | Multistate models: The Illness Death model | Cumulative incidence | Cumulative incidence I | CIF Delayed entry | Recurrent events | SessionInfo
Cumulative Incidence Regression1 months ago
Fine-Gray model | SE's for the baseline and predictions of FG | Comparison | Strata dependent Censoring weights | Logistic-link | Administrative Censoring | SessionInfo
Discrete Interval Censored Survival Models1 months ago
Discrete Interval Censored survival times | Discrete TTP | SessionInfo
dUtility data-frame manipulations1 months ago
Simple data manipulation for data-frames | dUtility functions | Renaming, deleting, keeping, dropping variables | Looking at the data | Sorting the data | Making new variables for the analysis | Making factors (groupings) | Working with factors | Making a factor from existing numeric variable and vice versa | SessionInfo
G-Computation or standardization for the Cox, Fine-Gray and binomial regression models for survival data1 months ago
G-computation for the Cox and Fine-Gray models | G-computation for the binomial regression | SessionInfo
GEE cluster standard errors and predictions for glm objects1 months ago
Utility functions for GLM objects | SessionInfo
Haplotype Discrete Survival Models1 months ago
Haplotype Analysis for discrete TTP | SessionInfo
IPCW Cumulative Cost1 months ago
Overview | HF-action data | Exceed threshold | Cumulative time lost for recurrent events | SessionInfo
Marginal modelling of clustered survival data1 months ago
Overview | Goodness of fit | Computational aspects | Cluster stratified Cox models | SessionInfo
Mediation Analysis for survival data1 months ago
Overview | Simulated Data | Mediation Weights | Binomial Regression | Binomial regression IPCW Mediation Analysis | Mediation Analysis | Multinomial regression | SessionInfo
Randomization for Cox Type rate models1 months ago
Two-Stage Randomization for counting process outcomes | Simple Randomization: Lu-Tsiatis marginal Cox model | Two-Stage Randomization CALGB-9823 for survival outcomes | Recurrent events: Simple Randomization | Twostage Randomization: Recurrent events | Causal assumptions for Two-Stage Randomization: Recurrent events | SessionInfo
Recurrent events1 months ago
Overview | Simulation of recurrent events | Utility functions | Marginal Mean | Generating data | Improving efficiency | Regression models for the marginal mean | Administrative censoring for the Ghosh-Lin model | Two-stage modelling | Simulations with specific structure | Other marginal properties | Multiple events | Looking at simulations with dependence | SessionInfo
Twin models1 months ago
Twin analysis, continuous traits | Polygenic model | Bibliography
Two-Stage Randomization for Competing risks and Survival outcomes1 months ago
Two-Stage Randomization CALGB-9823 | SessionInfo
While Alive estimands for Recurrent Events1 months ago
Composite outcomes involving death and marks | SessionInfo
The Art of Influence2 months ago
Influence functions | Working with influence functions with lava::estimate | Examples | Example: population mean | Example: generalized linear model | Example: right-censored outcomess | Example: random effects model / structural equation model | Example: quantile | Combining influence functions | Imbalanced data | \begin | \begin | Renaming and subsetting parameters | Clustered data (non-iid case) | Computational aspects | IF building blocks: transformations and the delta theorem | Example: Pearson correlation | Linear contrasts and hypothesis testing | Averaging | Average Treatment Effects | SessionInfo | Bibliography
Prediction models3 months ago
Introduction | Built-in learners | Usage | Update formula | Cross-validation | Prediction filter | Defining new learners | Fit function with formula and data arguments | Fit function with x and y arguments | Fit function with single data argument | Specials in formula
Estimating partial correlations with lava3 months ago
Simulation | Estimation and inference | Censored observations | SessionInfo | Bibliography
Non-linear latent variable models and error-in-variable models3 months ago
Estimation | Cross-validation | Specification of general functional forms | Mixture models | SessionInfo | Bibliography
Estimating a relative risk or risk difference with a binary exposure7 months ago
Introduction | Simulation | Estimation | MLE | DRE | Interactions | Risk-difference | Influence-function | SessionInfo